BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027A12LP1|AL428660
(859 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1772 1700 0.0
3x_Contig1791 147 4e-35
3x_Contig1782 147 4e-35
3x_Contig1573 147 4e-35
3x_Contig1240 147 4e-35
3x_Contig563 147 4e-35
3x_Contig1799 143 6e-34
3x_Contig1712 143 6e-34
3x_Contig1569 143 6e-34
>3x_Contig1772
Length = 25851
Score = 1700 bits (857), Expect = 0.0
Identities = 858/859 (99%)
Strand = Plus / Minus
Query: 1 atccagttatttatttattatatacccwcgccacagaatgcgatgcgctttctttcccct 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 12378 atccagttatttatttattatatacccacgccacagaatgcgatgcgctttctttcccct 12319
Query: 61 gcctgatctttcttcatatagctttttgctgcaaattggtgcgtagatgtatgcaaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12318 gcctgatctttcttcatatagctttttgctgcaaattggtgcgtagatgtatgcaaaata 12259
Query: 121 aaagtcgtagccaaattatgcacaccgtcggaaagtaacaatgaacccgatgtaagttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12258 aaagtcgtagccaaattatgcacaccgtcggaaagtaacaatgaacccgatgtaagttct 12199
Query: 181 ggtacttttgttaggaagtgtgaacaggtttaatacgatagaatgatagggtatgattaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12198 ggtacttttgttaggaagtgtgaacaggtttaatacgatagaatgatagggtatgattaa 12139
Query: 241 gtactagcaatgtgaaggcatctaaggggtttgatattgtgtgtgtgtctatgaatatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12138 gtactagcaatgtgaaggcatctaaggggtttgatattgtgtgtgtgtctatgaatatta 12079
Query: 301 tcagggagaaaggaagaggagatgccctgagaaaacgccgctgaataccatgtgtgaggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12078 tcagggagaaaggaagaggagatgccctgagaaaacgccgctgaataccatgtgtgaggg 12019
Query: 361 tagtcagacactttggtgcagggcagttccacattcaaacatcgcaaagtactatgccat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12018 tagtcagacactttggtgcagggcagttccacattcaaacatcgcaaagtactatgccat 11959
Query: 421 cttagtataggggttattacacatcgttgtggccgatgaaacccaggttcgattcctgga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11958 cttagtataggggttattacacatcgttgtggccgatgaaacccaggttcgattcctgga 11899
Query: 481 ggtggcagttacaattgaatttatcttacaaacaaacttttcaacggtttcgtggtctag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11898 ggtggcagttacaattgaatttatcttacaaacaaacttttcaacggtttcgtggtctag 11839
Query: 541 tcggttatggcatctgcttaacacgcagaacgtccccagttcgatcctgggcgaaatcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11838 tcggttatggcatctgcttaacacgcagaacgtccccagttcgatcctgggcgaaatcaa 11779
Query: 601 atgagaacgatatttggaagatcgattctattgttttttttagtattctcaacatacaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11778 atgagaacgatatttggaagatcgattctattgttttttttagtattctcaacatacaag 11719
Query: 661 taaaaacctgggcctccgcctcgcttgggtggacatagaaattttagcaccactatcggc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11718 taaaaacctgggcctccgcctcgcttgggtggacatagaaattttagcaccactatcggc 11659
Query: 721 caataaataaaataatcagtagtcgtctgggtgttaaagcacgttgcacatgacttgagt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11658 caataaataaaataatcagtagtcgtctgggtgttaaagcacgttgcacatgacttgagt 11599
Query: 781 tttcagtatactatagaggaatataacaactatcacgaaattggttgtgtggccgagcgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11598 tttcagtatactatagaggaatataacaactatcacgaaattggttgtgtggccgagcgg 11539
Query: 841 tctaaggcgcctgattcaa 859
|||||||||||||||||||
Sbjct: 11538 tctaaggcgcctgattcaa 11520
>3x_Contig1791
Length = 39945
Score = 147 bits (74), Expect = 4e-35
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 526 ggtttcgtggtctagtcggttatggcatctgcttaacacgcagaacgtccccagttcgat 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16659 ggtttcgtggtctagtcggttatggcatctgcttaacacgcagaacgtccccagttcgat 16718
Query: 586 cctgggcgaaatca 599
||||||||||||||
Sbjct: 16719 cctgggcgaaatca 16732
>3x_Contig1782
Length = 24703
Score = 147 bits (74), Expect = 4e-35
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 526 ggtttcgtggtctagtcggttatggcatctgcttaacacgcagaacgtccccagttcgat 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24262 ggtttcgtggtctagtcggttatggcatctgcttaacacgcagaacgtccccagttcgat 24321
Query: 586 cctgggcgaaatca 599
||||||||||||||
Sbjct: 24322 cctgggcgaaatca 24335
>3x_Contig1573
Length = 10819
Score = 147 bits (74), Expect = 4e-35
Identities = 74/74 (100%)
Strand = Plus / Minus
Query: 526 ggtttcgtggtctagtcggttatggcatctgcttaacacgcagaacgtccccagttcgat 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7127 ggtttcgtggtctagtcggttatggcatctgcttaacacgcagaacgtccccagttcgat 7068
Query: 586 cctgggcgaaatca 599
||||||||||||||
Sbjct: 7067 cctgggcgaaatca 7054
>3x_Contig1240
Length = 5468
Score = 147 bits (74), Expect = 4e-35
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 526 ggtttcgtggtctagtcggttatggcatctgcttaacacgcagaacgtccccagttcgat 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 ggtttcgtggtctagtcggttatggcatctgcttaacacgcagaacgtccccagttcgat 1074
Query: 586 cctgggcgaaatca 599
||||||||||||||
Sbjct: 1075 cctgggcgaaatca 1088
>3x_Contig563
Length = 1285
Score = 147 bits (74), Expect = 4e-35
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 526 ggtttcgtggtctagtcggttatggcatctgcttaacacgcagaacgtccccagttcgat 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ggtttcgtggtctagtcggttatggcatctgcttaacacgcagaacgtccccagttcgat 670
Query: 586 cctgggcgaaatca 599
||||||||||||||
Sbjct: 671 cctgggcgaaatca 684
>3x_Contig1799
Length = 39855
Score = 143 bits (72), Expect = 6e-34
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 416 gccatcttagtataggggttattacacatcgttgtggccgatgaaacccaggttcgattc 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30355 gccatcttagtataggggttattacacatcgttgtggccgatgaaacccaggttcgattc 30414
Query: 476 ctggaggtggca 487
||||||||||||
Sbjct: 30415 ctggaggtggca 30426
>3x_Contig1712
Length = 23668
Score = 143 bits (72), Expect = 6e-34
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 416 gccatcttagtataggggttattacacatcgttgtggccgatgaaacccaggttcgattc 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9799 gccatcttagtataggggttattacacatcgttgtggccgatgaaacccaggttcgattc 9858
Query: 476 ctggaggtggca 487
||||||||||||
Sbjct: 9859 ctggaggtggca 9870
>3x_Contig1569
Length = 11625
Score = 143 bits (72), Expect = 6e-34
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 416 gccatcttagtataggggttattacacatcgttgtggccgatgaaacccaggttcgattc 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7006 gccatcttagtataggggttattacacatcgttgtggccgatgaaacccaggttcgattc 7065
Query: 476 ctggaggtggca 487
||||||||||||
Sbjct: 7066 ctggaggtggca 7077
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5747
Number of Sequences: 1807
Number of extensions: 5747
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 9
length of query: 859
length of database: 10,358,551
effective HSP length: 16
effective length of query: 843
effective length of database: 10,329,639
effective search space: 8707885677
effective search space used: 8707885677
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)